gds::vcfstream Member List

This is the complete list of members for gds::vcfstream, including all inherited members.

GenomicDataStream()	gds::GenomicDataStream	inline
GenomicDataStream(const Param &param)	gds::GenomicDataStream	inline
getChromRanges() override	gds::vcfstream	inlinevirtual
getMAF() const	gds::GenomicDataStream	inline
getMinVariance()	gds::GenomicDataStream	inline
getNextChunk(DataChunk< arma::mat > &chunk, const bool &useFilter=true) override	gds::vcfstream	inlinevirtual
getNextChunk(DataChunk< arma::sp_mat > &chunk, const bool &useFilter=true) override	gds::vcfstream	inlinevirtual
getNextChunk(DataChunk< Eigen::MatrixXd > &chunk, const bool &useFilter=true) override	gds::vcfstream	inlinevirtual
getNextChunk(DataChunk< Eigen::SparseMatrix< double > > &chunk, const bool &useFilter=true) override	gds::vcfstream	inlinevirtual
getNextChunk(DataChunk< Rcpp::NumericMatrix > &chunk, const bool &useFilter=true) override	gds::vcfstream	inlinevirtual
getNextChunk(DataChunk< vector< double > > &chunk, const bool &useFilter=true) override	gds::vcfstream	inlinevirtual
getParam() const	gds::GenomicDataStream	inline
getSampleNames() override	gds::vcfstream	inlinevirtual
getStreamType() override	gds::vcfstream	inlinevirtual
n_samples() override	gds::vcfstream	inlinevirtual
param	gds::GenomicDataStream	protected
setChunkSize(const int &chunkSize)	gds::GenomicDataStream	inline
setMinVariance(const double &value)	gds::GenomicDataStream	inline
setRegions(const vector< string > &regions) override	gds::vcfstream	inlinevirtual
variantToString(const BcfRecord &record)	gds::vcfstream	inlinestatic
vcfstream()	gds::vcfstream	inline
vcfstream(const Param &param)	gds::vcfstream	inline
~GenomicDataStream()	gds::GenomicDataStream	inlinevirtual
~vcfstream() override	gds::vcfstream	inline